· Press Release

Maintaining the brain’s maturity

Researchers identify neuronal granules as guards of the adult nervous system

Neurons in fruit flies, but also in other organisms, use membrane-less cellular compartments consisting of RNA molecules and proteins to regulate their gene expression and cellular processes. Researchers at the MPI for Immunobiology and Epigenetics and the Cluster of Excellence CIBSS - Centre for Integrative Biological Signalling Studies at the University of Freiburg have now discovered how and when these ribonucleoprotein (RNP) granules form and were able to show that a specific type of RNP granules are crucial for maintaining the maturity of the adult nervous system. These findings in the fruit fly Drosophila melanogster also have relevance for research into neurodegenerative diseases.

The nervous system of any organism is predominantly made up of neurons. During development, neural stem cells divide into neurons, which progressively establish an intricate network of connections. Neurons communicate through this network by sending and receiving electrical signals.

The precise regulation of gene expression is critical for the functioning of neurons in the developing and mature brain, much of which occurs through changing levels or locations of the messenger molecule RNA. Neurons employ various strategies to ensure the robustness of their RNA regulation, including the formation of ribonucleoprotein (RNP) granules. These are membrane-less cellular compartments composed of RNA and RNA-binding proteins that tune time and location of protein expression and affect many cellular processes that require complex protein distribution.

lncRNA mimi as determinant of protein condensation in neurons

Neurons assemble proteins and their associated RNAs into these granules to optimize efficiency and coordinately regulate large sets of transcripts. Interestingly, the deletion of key granule proteins not only causes the disassembly of the granule, but also disrupts other protein functions. “Until now, it was not possible to uncouple the role of neuronal granules per se, from the function of granule-constituent proteins”, says Prof. Dr. Valérie Hilgers, Group leader at MPI of Immunobiology and Epigenetics and CIBSS researcher.

However, using Drosophila melanogaster as a research model, Hilgers lab identified a highly specific and absolutely necessary component of a particularly large and widespread neuronal granule type that can also be found in abundance in the brain of many other animals including humans.

The team named this component mimi, after its discoverer and doctoral researcher in the Hilgers lab, Dominika Grzejda. “When we removed mimi, the formation of the granules was disrupted, but not the expression of major granule-forming proteins,” says Dominika Grzejda, first-author of the study.

mimi granules are lost in mimi mutant brains. Microscopy images of adult Drosophila brains. mimi granules are marked with the Staufen protein and mimi RNA. Exemplary mimi granules are indicated with arrows. Scale bars 4 µm.

mimi granules maintain nervous system maturity

Studying neurons of the flies, the researchers were able to determine the physiological function of the mimi granule. It turned out that mimi RNA is a very unusual type of RNA: it does not, like messenger RNAs, encode a protein. It is completely absent from the brain during development and only starts to be expressed when flies enter adulthood – a stage that in Drosophila, begins with the exclusion from the pupae. Once expressed, mimi is extremely abundant. However, it can be only found in one particular place: granules. As a consequence, mimi granules start assembling around mimi once the brain is fully developed. The scientists in Freiburg show that mimi acts as an architectural RNA for the neuronal granule and provides for the first time a handle to interrogate a granule’s functions independently of its constituent proteins.

mimi granules are specific to the adult brain. Microscopy images of the Drosophila neurons in embryo, larva and adult. mimi granules are marked with the Staufen protein and indicated with arrows. Scale bars 4 µm.

“We found that mimi granules are essential to perform adult neuronal functions and to maintain the neuron in a mature molecular state”, says Dominika Grzejda, first-author of the study. Loss of mimi granules disrupts neuropeptide-mediated signaling and upregulates cell cycle genes, which are normally repressed in non-dividing, terminally differentiated adult neurons. Interestingly, the loss of mature neuronal transcriptome pattern in mimi mutant flies causes phenotypes of neurodegeneration. The scientists observe progressive deterioration of motor functions and a shorter life.

The study by the Hilgers lab advances our understanding of the mechanisms associated with the condensation of neuronal RBPs and provides insights into in vivo consequences of granules hypo-assembly. This brings us one step closer to developing effective treatments for neurological diseases resulting from the dysregulation of RNA-protein condensation.

 

Original publication

Grzejda, D., Mach, J., Schweizer, J. A., Hummel, B., Rezansoff, A. M., Eggenhofer, F., Panhale, A., Lalioti, M. E., Cabezas-Wallscheid, N., Backofen, R., Felsenberg, J., Hilgers, V. (2022): The long noncoding RNA mimi scaffolds neuonal granules to maintain nervous system maturity. In: Science Advances 8(39). DOI: 10.1126/sciadv.abo5578

 

Original press release

CIBSS profile Prof. Dr. Valerie Hilgers